DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and zgc:77262

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_991217.1 Gene:zgc:77262 / 402952 ZFINID:ZDB-GENE-040426-1811 Length:331 Species:Danio rerio


Alignment Length:194 Identity:37/194 - (19%)
Similarity:75/194 - (38%) Gaps:44/194 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 VFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALAL-GLSGQRL 302
            :|...::......:|...|...|.|.|..::        |...::..|:.|:...|: .|....:
Zfish     4 IFVGNVASATTEDELRALFEKYGAVSDCDIL--------KNYGFVHMDEEEAAQKAVSALHKHEV 60

  Fly   303 LGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLI 367
            .|..|.|::.   ..:::||.            ::|||::...:....::.:|:||||:....::
Zfish    61 NGSRITVEYA---TTKVRNAT------------KIYVGNVPEGVAAAKIKELFQPFGKVVECDIV 110

  Fly   368 MDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTG 431
                    |.|.|:.....::|..|:.:||..::.|:.:.|            ||......|.|
Zfish   111 --------KNYAFVHMQRENEALDAIAKLNHSKVDGQKIFV------------SLSRSNPSRNG 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 37/194 (19%)
zgc:77262NP_991217.1 RRM1_2_CoAA_like 3..68 CDD:409779 13/71 (18%)
RRM1_2_CoAA_like 79..143 CDD:409779 16/71 (23%)

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