DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Caper and Rbp6

DIOPT Version :9

Sequence 1:	NP_609095.1	Gene:	Caper / 33989	FlyBaseID:	FBgn0031883	Length:	594	Species:	Drosophila melanogaster
Sequence 2:	NP_001097631.1	Gene:	Rbp6 / 39919	FlyBaseID:	FBgn0260943	Length:	499	Species:	Drosophila melanogaster

Alignment Length:	256	Identity:	64/256 - (25%)
Similarity:	111/256 - (43%)	Gaps:	29/256 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   230 SPEE--RDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 292
            ||.|  .|...:|...||.:.....|.::|...|.:.:..::....|:|.:|..::.|.||.||.
  Fly    20 SPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84

  Fly   293 LALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAF----QPKSHTGPMRLYVGSLHFNITEDMLRG 353
                         .::.|.|.....:..:...||    .||..|...:::||.|....|.:.::.
  Fly    85 -------------KVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKS 136

  Fly   354 IFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLDMN 418
            .||.||.|:...|:.|.:|.|.:|:||:|:.:.|...|..| ::..|:..::::......:..|.
  Fly   137 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-IHFHEINNKMVECKKAQPKEVML 200

  Fly   419 TTSL-DTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANALL--ATAPQPAPLQQQE 476
            ..:| .|....|:     |.|.| :::..:.....|...|||..||  :.|...:.||||:
  Fly   201 PANLAKTRAAGRS-----AYGEL-VVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQ 255

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	14/71 (20%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	21/71 (30%)
		RBM39linker	425..500	CDD:292157	15/54 (28%)
		RRM3_RBM39_like	483..567	CDD:240731
Rbp6	NP_001097631.1	RRM1_MSI	31..105	CDD:241020	16/86 (19%)
Rbp6	NP_001097631.1	RRM2_MSI	119..192	CDD:240769	21/73 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463937
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840