Protein Alignment Caper and dazl

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_989079.1
• Gene: dazl / 394676
• XenbaseID: XB-GENE-1006218
• Length: 286
• Species: Xenopus tropicalis
• Alignment Length: 225
• Identity: 45/225 - (20%)
• Similarity: 85/225 - (37%)
• Gaps: 79/225 - (35%)

  Fly   328 PKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKA 392
            |:....|..::||.:...:.|..:..:||.:||:..:::|.| .||.||||||:::::..|.:|.
 Frog    23 PEGKVIPNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITD-RTGVSKGYGFVSFYDEVDVQKI 86

  Fly   393 LEQLNGFELAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQA 457
            ::....|.  |:.:|:|
 Frog    87 VKSQINFH--GKKLKLG------------------------------------------------ 101

  Fly   458 AANALLATAPQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLH 522
                       ||..:.|.:...:.|...::|    |.|:.:|||:.:..|..::
 Frog   102 -----------PAIRKMQRICTYVQTSPVVIS----PPTQFHPTWNSQNADSYIQ---------- 141

  Fly   523 IHVDTISHTGTVYVK-CPSTTTAVLAVNAL 551
             |...||.. |.||: ||..::..:|:..:
 Frog   142 -HSPIISPV-TQYVQACPYPSSPPMAIQQI 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	45/225 (20%)
dazl	NP_989079.1	RRM_DAZL	25..106	CDD:410073	26/142 (18%)
		PABP-1234	<30..198	CDD:130689	43/218 (20%)