DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and eif3g

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_957293.1 Gene:eif3g / 393974 ZFINID:ZDB-GENE-040426-1076 Length:293 Species:Danio rerio


Alignment Length:248 Identity:62/248 - (25%)
Similarity:98/248 - (39%) Gaps:60/248 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 RLSPIRERKRSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQR-- 247
            |...|..||.|.:.:|.:|.::.| ||......||.|..|...:          ||...:|.:  
Zfish    56 RTFKIETRKASKAVARRKNWKKFG-NSEYDAPGPNVATTTVSDD----------VFMTFISSKED 109

  Fly   248 VRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD-----PESVALALGLSGQRLLGVPI 307
            :.|:|.:|  ..:.|:...::::|...|.........:.|     .:.:|..||||         
Zfish   110 LNAQDQDE--DPMNKLEGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLS--------- 163

  Fly   308 MVQHTQAEKNRLQNAAPAFQPKSHTG---PMRLYVGSLH-------------------FNITEDM 350
                 ..||.:.....||...::.||   |..|..|...                   .|::||.
Zfish   164 -----TGEKEKAAEPEPAQPVQNKTGKYVPPSLRDGGTRRGESMQPNRRADDNATIRVTNLSEDT 223

  Fly   351 ----LRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGF 399
                |:.:|.|||.|..|.|..|..||:|||:..|::|..:||.:|:..::||
Zfish   224 RETDLQELFRPFGSISRIYLAKDKNTGQSKGFALISFHRREDAARAIAGVSGF 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 52/220 (24%)
eif3gNP_957293.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
eIF3g 29..149 CDD:463545 24/105 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..206 10/56 (18%)
RRM_eIF3G_like 213..288 CDD:409842 24/64 (38%)
Blue background indicates that the domain is not in the aligned region.

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