Protein Alignment Caper and rbm28

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_956615.2
• Gene: rbm28 / 393291
• ZFINID: ZDB-GENE-040426-960
• Length: 856
• Species: Danio rerio
• Alignment Length: 319
• Identity: 68/319 - (21%)
• Similarity: 125/319 - (39%)
• Gaps: 53/319 - (16%)

  Fly   149 DKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRERKRSHSRSRDRNSRRRGTNSPR 213
            ||:::.|.....:.|::.|..|..:......||   ::.....:|:...:.|.:|::....:...
Zfish    38 DKEKKCRGFGYVTFSMEDDAQRALKEVKLYDDQ---KIFVTVAKKKLDDKKRKKNAKTNKDSGDT 99

  Fly   214 RRSPPNGADRTTPTELSPEERDARTVFCIQ-LSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRF 277
            ..|..:|..:.|....||.::.......|: ||.:....:|::.||..|.|.:.| |......:.
Zfish   100 EESQKSGETKNTEKIPSPTKKKENGWLIIRNLSFKCEDDELKQIFSKFGTVLETR-IPLKPDGKK 163

  Fly   278 KGIAYIEF---DDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG------ 333
            ||.|:::|   .:.|....|:.....|  ..|:.|..|   .:..::|.|....:.|..
Zfish   164 KGFAFVQFKCVSEAEKARAAMNRKAIR--DRPVEVDWT---TSNTESADPEDTEEPHKAEETTST 223

  Fly   334 -----------PMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 387
                       ..||.:.:|.|...||.|:.||..||.:...::.:..: |:.:|:.|:.:....
Zfish   224 EKFKGIRKIKLKSRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPD-GKKRGFAFVLFKRMP 287

  Fly   388 DAKKALEQLNGFELAGRLMKV------------------GNVTERLDMNTTSLDTDEMD 428
            :|.|||..:||.::..|.:.|                  ||:.|.   |.|. ..:|.|
Zfish   288 EAGKALTAMNGKKIKDRQVAVDWAIAKDKYLATQSASAAGNIKEE---NVTG-KVEEAD 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	57/255 (22%)
rbm28	NP_956615.2	None