Protein Alignment Caper and SLIRP1

DIOPT Version :9

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001027083.1
• Gene: SLIRP1 / 3772560
• FlyBaseID: FBgn0064117
• Length: 90
• Species: Drosophila melanogaster
• Alignment Length: 76
• Identity: 25/76 - (32%)
• Similarity: 44/76 - (57%)
• Gaps: 7/76 - (9%)

  Fly   336 RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFE 400
            |::||:|.:.:....|||.|..||::.:..:|.|..||.||||||:::::.    .|||::...:
  Fly    16 RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSL----TALEKIENEQ 76

  Fly   401 ---LAGRLMKV 408
               |.|..:.:
  Fly    77 KHILEGNYLNI 87

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729
		RRM2_RBM23_RBM39	337..409	CDD:240730	24/75 (32%)
		RBM39linker	425..500	CDD:292157
		RRM3_RBM39_like	483..567	CDD:240731
SLIRP1	NP_001027083.1	RRM_SLIRP	16..88	CDD:409688	25/76 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463940
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930