DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and tsu

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_610454.2 Gene:tsu / 35924 FlyBaseID:FBgn0033378 Length:165 Species:Drosophila melanogaster


Alignment Length:82 Identity:31/82 - (37%)
Similarity:43/82 - (52%) Gaps:6/82 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   333 GPMR------LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKK 391
            ||.|      |:|.|:|....||.::..|..:|:|..|.|.:|..||.||||..:.|.....|..
  Fly    65 GPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALA 129

  Fly   392 ALEQLNGFELAGRLMKV 408
            |.|.|||.|:.|:.::|
  Fly   130 AKEALNGAEIMGQTIQV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 31/82 (38%)
tsuNP_610454.2 PBP2_NikA_DppA_OppA_like 10..>80 CDD:445520 5/14 (36%)
RRM_RBM8 67..154 CDD:409762 29/80 (36%)

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