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Protein Alignment Caper and U2af50
DIOPT Version :10
| Sequence 1: | NP_609095.1 |
Gene: | Caper / 33989 |
FlyBaseID: | FBgn0031883 |
Length: | 594 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001245708.1 |
Gene: | U2af50 / 32602 |
FlyBaseID: | FBgn0005411 |
Length: | 427 |
Species: | Drosophila melanogaster |
| Alignment Length: | 123 |
Identity: | 22/123 - (17%) |
| Similarity: | 47/123 - (38%) |
Gaps: | 19/123 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 TSSTNDSAEI---PSTSTEATVSGFGSFGRKD----------NAQDEAVERISAELDNSKLQEVM 70
:|....|:|: |...:|...|..|:..:|: |..|:..|| |.....|::..
Fly 2 SSRKKASSEVYVPPGRRSEGGSSNGGTPLKKEAPETDDVVPPNCCDDEEER---ETKYQNLEQQF 63
Fly 71 GISGFGRKQAKQF--DINEM-IQKAKQNAPKAAVDEKAIIDPDDERKGKDDDDDDEEE 125
|....|...:..: .:|.. :.|.:.|..:.:..:..::.....|.|...:.::|::
Fly 64 GAIAIGSSSSSNWRSQMNPTGLSKEEMNIARRSAGKTDLLQKSTRRLGGSKNQNNEQD 121
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Caper | NP_609095.1 |
SF-CC1 |
213..578 |
CDD:273721 |
|
| U2af50 | NP_001245708.1 |
U2AF_lg |
<50..427 |
CDD:273727 |
12/75 (16%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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