DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and TRA2A

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_037425.1 Gene:TRA2A / 29896 HGNCID:16645 Length:282 Species:Homo sapiens


Alignment Length:310 Identity:72/310 - (23%)
Similarity:104/310 - (33%) Gaps:116/310 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ERERERDRSRRSRSRDERGGGGRYGDRDKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRL 186
            |......|..||:|:...|...|.       :|..|.|.....:|.:..:...||||:.:.|.|.
Human     5 EENNFEGRESRSQSKSPTGTPARV-------KSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRR 62

  Fly   187 SPIRE--RKRSHSRSRDRNSRRRG-TNSPRRR-----SPPNGADRTTPTELSPEERDARTVFCIQ 243
            ...|.  |.||||.|..|.||.|. |...|||     ||.:...|.|.:..:|            
Human    63 HSHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANP------------ 115

  Fly   244 LSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIM 308
                                                       ||.:.....|||          
Human   116 -------------------------------------------DPNTCLGVFGLS---------- 127

  Fly   309 VQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETG 373
                                        ||.       ||..||.:|..:|.:..:.::.|..||
Human   128 ----------------------------LYT-------TERDLREVFSRYGPLSGVNVVYDQRTG 157

  Fly   374 RSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVG-NVTERLDMNTTSL 422
            ||:|:.|:.:...||:|:|:|:.||.||.||.::|. ::|:|....|..:
Human   158 RSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 43/216 (20%)
TRA2ANP_037425.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118 38/174 (22%)
RRM_TRA2 118..197 CDD:409798 30/123 (24%)
Linker 198..225 2/10 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..245 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..282
Blue background indicates that the domain is not in the aligned region.

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