DRSC/TRiP Functional Genomics Resources

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Protein Alignment Caper and Eif3g

DIOPT Version :10

Sequence 1:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster
Sequence 2:NP_001013113.1 Gene:Eif3g / 298700 RGDID:1307191 Length:320 Species:Rattus norvegicus


Alignment Length:232 Identity:58/232 - (25%)
Similarity:100/232 - (43%) Gaps:36/232 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 IRERKRSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDL 253
            |..||.|.:.:|.:|.::.| ||......||.|..|...::|        :..|...:.:..::.
  Rat    87 IETRKASKAVARRKNWKKFG-NSEFDPPGPNVATTTVSDDVS--------MTFITSKEDLNCQEE 142

  Fly   254 EEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD-----PESVALALGLSGQRLLGVPIMVQHTQ 313
            |:   .:.|::..::::|...|.........:.|     .:.:|..||||......:|..::..|
  Rat   143 ED---PMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQ 204

  Fly   314 AEKNRLQNAAPAFQPKSHTGPMR----------------LYVGSLHFNITEDMLRGIFEPFGKID 362
            |.:|:.....|   |....|..|                :.|.:|..:..|..|:.:|.|||.|.
  Rat   205 AAQNKTGKYVP---PSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSIS 266

  Fly   363 AIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGF 399
            .|.|..|..||:|||:.||::|..:||.:|:..::||
  Rat   267 RIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGF 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 49/208 (24%)
Eif3gNP_001013113.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60
eIF3G 62..173 CDD:240597 19/97 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 205..233 6/30 (20%)
RRM_eIF3G_like 240..315 CDD:409842 25/64 (39%)
Blue background indicates that the domain is not in the aligned region.

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