Protein Alignment Caper and rsp-8

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001255142.1
• Gene: rsp-8 / 176613
• WormBaseID: WBGene00004705
• Length: 309
• Species: Caenorhabditis elegans
• Alignment Length: 334
• Identity: 63/334 - (18%)
• Similarity: 90/334 - (26%)
• Gaps: 182/334 - (54%)

  Fly    82 RDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERERERDRSRRSRSRDERGGGGRYG 146
            |.|.|.||..|.::..|.|:|.......:.|          ||||..|||..|:|...||||..|
 Worm     4 RSRSNSRSQSRSRENSRGRSRSASKSPVYHR----------RERESSRSRSPRARYGGGGGGGGG 58

  Fly   147 DRDKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRERKRSHSRSRDRNSRRRGTNS 211
                        ||                |.|:||..|.:|
 Worm    59 ------------GG----------------RGRNQQYDRENP----------------------- 72

  Fly   212 PRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKR 276
                                                                             
 Worm    73 ----------------------------------------------------------------- 72

  Fly   277 FKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGS 341
                                 ...:.|||                    |...|:|
 Worm    73 ---------------------QPSKCLGV--------------------FNLSSYT--------- 87

  Fly   342 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLM 406
                 ||..||.:|..||:|:...|:.|..:|.|:|:|||.::..:||..|.::|...:|.|..:
 Worm    88 -----TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKI 147

  Fly   407 KVG-NVTER 414
            :|. ::|:|
 Worm   148 RVDFSLTKR 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	31/203 (15%)
rsp-8	NP_001255142.1	RRM_TRA2	75..154	CDD:409798	29/112 (26%)