Protein Alignment Caper and daz-1

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_495036.3
• Gene: daz-1 / 173931
• WormBaseID: WBGene00000935
• Length: 498
• Species: Caenorhabditis elegans
• Alignment Length: 143
• Identity: 38/143 - (26%)
• Similarity: 63/143 - (44%)
• Gaps: 37/143 - (25%)

  Fly   310 QHTQAEKNRLQNAA---PAFQPKSHTG--------------------------PMRLYVGSLHFN 345
            |:.|.::|:.|.||   .:|.|::.|.                          |.|::||....:
 Worm    12 QNQQHQQNQSQQAAHQMVSFMPQTPTSLPSTPIQLYPTGAAALIPAPPTYELIPNRIFVGGFPTS 76

  Fly   346 ITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDA----KKALEQLNGFELAGRLM 406
            .||..||..||.|..:..::::...: |:||||||||:...|.|    |...:||   |...|.:
 Worm    77 TTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEIRKLTPKQL---EFRSRKL 137

  Fly   407 KVGNVTERLDMNT 419
            .:|....:::.|:
 Worm   138 NLGPAIRKINSNS 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	38/143 (27%)
daz-1	NP_495036.3	RRM_DAZL_BOULE	64..145	CDD:409846	28/84 (33%)
		PABP-1234	<66..265	CDD:130689	28/89 (31%)