| Sequence 1: | NP_609095.1 | Gene: | Caper / 33989 | FlyBaseID: | FBgn0031883 | Length: | 594 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_573505.2 | Gene: | Rbm39 / 170791 | MGIID: | 2157953 | Length: | 530 | Species: | Mus musculus |
| Alignment Length: | 619 | Identity: | 307/619 - (49%) |
|---|---|---|---|
| Similarity: | 380/619 - (61%) | Gaps: | 118/619 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAEDFDVEAMLEAPYMKNNVSAGSGGSGGRKRSGSSPGGGGGHDDDYAENGPRNGSGGGSSHKKQ 65
Fly 66 SKRSRSRSGSRDGKSRRDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERERERDRS 130
Fly 131 RRSRSRDERGGG---GRYGDRDKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRER 192
Fly 193 KRSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTE-LSPEERDARTVFCIQLSQRVRARDLEEF 256
Fly 257 FSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQN 321
Fly 322 AAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNA 386
Fly 387 DDAKKALEQLNGFELAGRLMKVGNVTERLDMNTTS--LDTDEMDRTGIDLGATGRLQLMFKLAEG 449
Fly 450 AGLAVPQAAANAL-----------------------LATAPQPAPLQQQEVAPSIATQCFILSNM 491
Fly 492 FDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWF 556
Fly 557 AGRVITAAYVPVINYHTMFPDSINAVDLVTSTRK 590 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Caper | NP_609095.1 | RRM1_RBM39_like | 238..310 | CDD:240729 | 48/71 (68%) |
| RRM2_RBM23_RBM39 | 337..409 | CDD:240730 | 59/71 (83%) | ||
| RBM39linker | 425..500 | CDD:292157 | 42/97 (43%) | ||
| RRM3_RBM39_like | 483..567 | CDD:240731 | 58/83 (70%) | ||
| Rbm39 | NP_573505.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..146 | 68/232 (29%) | |
| SF-CC1 | 46..518 | CDD:273721 | 278/529 (53%) | ||
| Interaction with JUN. /evidence=ECO:0000269|PubMed:11704680 | 291..406 | 63/114 (55%) | |||
| Activating domain | 291..355 | 44/63 (70%) | |||
| Interaction with ESR1 and ESR2. /evidence=ECO:0000269|PubMed:11704680 | 355..406 | 18/50 (36%) | |||
| Interaction with NCOA6. /evidence=ECO:0000269|PubMed:11704680 | 406..530 | 70/123 (57%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 126 | 1.000 | Domainoid score | I5401 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0147 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 511 | 1.000 | Inparanoid score | I1302 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG51929 | |
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0002599 | |
| OrthoInspector | 1 | 1.000 | - | - | oto93576 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101917 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23139 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1252 |
| SonicParanoid | 1 | 1.000 | - | - | X1707 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 13 | 12.860 | |||||