Protein Alignment Caper and Hnrnpab

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_001041526.1
• Gene: Hnrnpab / 15384
• MGIID: 1330294
• Length: 332
• Species: Mus musculus
• Alignment Length: 197
• Identity: 56/197 - (28%)
• Similarity: 87/197 - (44%)
• Gaps: 27/197 - (13%)

  Fly   211 SPRRRSPPNGADRTTPT-----------ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVR 264
            :|...:...|...|.|:           ..|..|.||..:|...||.....:||:::|:..|:|.
Mouse    38 APAASAGSGGGTTTAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVV 102

  Fly   265 DVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPK 329
            |..:.....|.|.:|..:|.|.|..||...|.....||.|..|..:...|.|.
Mouse   103 DCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKK------------ 155

  Fly   330 SHTGPM-RLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 393
               .|: :::||.|:...||:.:|..|..||:|:||:|.:|.:..:.:|:.|||:...|..||.|
Mouse   156 ---DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVL 217

  Fly   394 EQ 395
            |:
Mouse   218 EK 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	55/195 (28%)
Hnrnpab	NP_001041526.1	CBFNT	1..75	CDD:311868	7/36 (19%)
		RRM1_hnRNPAB	71..150	CDD:410151	25/78 (32%)
		RRM2_hnRNPAB	155..234	CDD:409997	24/80 (30%)