Protein Alignment Caper and MSI2

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: XP_005257072.1
• Gene: MSI2 / 124540
• HGNCID: 18585
• Length: 346
• Species: Homo sapiens
• Alignment Length: 180
• Identity: 52/180 - (28%)
• Similarity: 89/180 - (49%)
• Gaps: 18/180 - (10%)

  Fly   219 NGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYI 283
            ||:..|:.: .:..:.|...:|...||.:.....|.::||..|::|:..::....|||.:|..::
Human     4 NGSQGTSGS-ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67

  Fly   284 EFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAF----QPKSHTGPMRLYVGSLHF 344
            .|.||.||        .::||.|    |.:.:...: :...||    |||..|...:::||.|..
Human    68 TFADPASV--------DKVLGQP----HHELDSKTI-DPKVAFPRRAQPKMVTRTKKIFVGGLSA 119

  Fly   345 NITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALE 394
            |...:.::..||.|||::...|:.|..|.|.:|:||:|:.|.|..:|..|
Human   120 NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	52/180 (29%)
MSI2	XP_005257072.1	RRM1_MSI2	17..109	CDD:410153	28/104 (27%)
		RRM2_MSI	111..184	CDD:240769	21/59 (36%)