Protein Alignment Caper and rbm23

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: XP_004910812.2
• Gene: rbm23 / 100144745
• XenbaseID: XB-GENE-494491
• Length: 421
• Species: Xenopus tropicalis
• Alignment Length: 518
• Identity: 244/518 - (47%)
• Similarity: 303/518 - (58%)
• Gaps: 129/518 - (24%)

  Fly     2 AEDFD--VEAMLEAPYMKNNVSAGSGGSGGRKRSGSSPGGGGGHDDDYAENGPRNGSGGGSSHKK 64
            ::|||  :||||||||              :.:...||                         .|
 Frog     3 SDDFDIVIEAMLEAPY--------------KNKEEESP-------------------------TK 28

  Fly    65 QSKRSRSRSGSRDGKSRRDRGNERSSHRDKDKERDRNRDGGDRDRHRREGGDRDRERERERERDR 129
            ::|:.:..|.:|.|.|      |...|....|:|.|::             .|||:|.|.|.|||
 Frog    29 ETKKEQESSSNRTGNS------EHHHHSSSSKKRCRSQ-------------SRDRKRSRSRSRDR 74

  Fly   130 SRRSRSRDERGGGGRYGDRDKDRRSRDRRGGSKSLQVDRSRDKRRRSRSRDQQRKRLSPIRERKR 194
            .:|                   |.||||.         ||.|.|||||||          |...|
 Frog    75 HKR-------------------RSSRDRH---------RSHDHRRRSRSR----------RRSSR 101

  Fly   195 SHSRSRDRNSR-----RRGTNSPRRRSPPNGADRTTPTE----LSPEERDARTVFCIQLSQRVRA 250
            ||.|.||.:||     ||.|.| |.|||.: ..:|.|.|    |||||||||||||:||:.|:|:
 Frog   102 SHDRRRDEHSRHHNSGRRYTRS-RSRSPQH-KQKTPPREPETILSPEERDARTVFCMQLAARIRS 164

  Fly   251 RDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAE 315
            ||||:|||:||||||||:|:...::|.|||||:||.|.:||.||:||:|||||||||:||.:|||
 Frog   165 RDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPIIVQVSQAE 229

  Fly   316 KNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGF 380
            ||||...:...| :.:.|||||||||||||||||||||||||||||:.|||:.:.:||||||:||
 Frog   230 KNRLAAMSNNLQ-RGNPGPMRLYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGF 293

  Fly   381 ITYHNADDAKKALEQLNGFELAGRLMKVGNVTERLD--MNTTSLDTDEMDRTGIDLGATGRLQLM 443
            ||:.:|:.|::|||||||||||||.||||:||:.|:  ...:.||:||::|||||||||||||||
 Frog   294 ITFTDAECARRALEQLNGFELAGRPMKVGHVTDHLEGGGEASFLDSDELERTGIDLGATGRLQLM 358

  Fly   444 FKLAEGAGLAVPQAAANAL-------------LATAPQPAPLQQQEVAPSIATQCFILSNMFD 493
            .|||||.||.:|.||..||             ..||..||    ..:|.||:.|.|.|||:|:
 Frog   359 TKLAEGTGLQIPLAAQAALQLGGAIPLTALNPTLTALSPA----LNLAQSISAQSFQLSNLFN 417

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	182/300 (61%)
rbm23	XP_004910812.2	SF-CC1	129..419	CDD:273721	178/295 (60%)