DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and RAB11A

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_004654.1 Gene:RAB11A / 8766 HGNCID:9760 Length:216 Species:Homo sapiens


Alignment Length:178 Identity:78/178 - (43%)
Similarity:125/178 - (70%) Gaps:4/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            ::|.:|||:||:|::||||:.|:.|||:..|.....:||||:|..::::|:|:.||.||||||||
Human     6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIP 130
            ||:|:||.:|||.|...:|||||:...|::.:..||:|::::|:|.::.:|||||:| |..|.:|
Human    71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135

  Fly   131 TQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAE---LIGQARSKD 175
            |.....||:::.:.|:||||.::.|||..|..|..|   ::.|.:..|
Human   136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSD 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 76/169 (45%)
RAB11ANP_004654.1 Rab11_like 9..173 CDD:206660 75/163 (46%)

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