DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and YPT7

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:174 Identity:64/174 - (36%)
Similarity:104/174 - (59%) Gaps:8/174 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKI-KLQIWDTAGQER 68
            |.:.|::::|::|||||.|:.|:....:.....||||.||:.|.|.|:|:|: .:|:||||||||
Yeast     6 KNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQER 70

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLK----ILVGNKTDRDDRE- 128
            |:|:..::||.|...:||||::...:|:.:..|..|...:||....:    :::|||.|.::.: 
Yeast    71 FQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKK 135

  Fly   129 -IPTQIGEEFAKQ-HDMYFLETSAKEAENVERLFYEIAAELIGQ 170
             :..:..:|.||. .|:....||||.|.||:..|.|||...:.|
Yeast   136 IVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 63/170 (37%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 63/171 (37%)

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