DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and RAB2B

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_116235.2 Gene:RAB2B / 84932 HGNCID:20246 Length:216 Species:Homo sapiens


Alignment Length:226 Identity:93/226 - (41%)
Similarity:137/226 - (60%) Gaps:32/226 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |.:|||.:::|:.||||:||:.:||...|.|....||||:|..:.|.::|::||||||||||||.
Human     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQ 132
            |||||:||||.|...:|||||:.:.||:.|..||.:.:::::|.::.:|:|||:|.:. |::..:
Human    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKRE 132

  Fly   133 IGEEFAKQHDMYFLETSAKEAENVERLFYEIAAEL-------------------IGQARSKDGSS 178
            .||.||::|.:.|:|||||.|.|||..|...|.|:                   ||..:|.  |:
Human   133 EGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSI--ST 195

  Fly   179 SAAAAAAQRQSEGSSIGLGSFSAKAAQSNCC 209
            |...:|:||.|.  .||        :.|.||
Human   196 SVGPSASQRNSR--DIG--------SNSGCC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 79/183 (43%)
RAB2BNP_116235.2 PLN03108 1..216 CDD:178655 91/224 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..216 10/38 (26%)

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