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Protein Alignment Rab30 and RA-5
DIOPT Version :9
| Sequence 1: | NP_001245926.1 |
Gene: | Rab30 / 33988 |
FlyBaseID: | FBgn0031882 |
Length: | 223 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_171715.1 |
Gene: | RA-5 / 837023 |
AraportID: | AT1G02130 |
Length: | 203 |
Species: | Arabidopsis thaliana |
| Alignment Length: | |
Identity: | / - (0%) |
| Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rab30 | NP_001245926.1 |
Rab30 |
1..168 |
CDD:133314 |
|
| RA-5 | NP_171715.1 |
Rab1_Ypt1 |
7..172 |
CDD:206661 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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