DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab2b

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_766189.1 Gene:Rab2b / 76338 MGIID:1923588 Length:216 Species:Mus musculus


Alignment Length:214 Identity:90/214 - (42%)
Similarity:134/214 - (62%) Gaps:8/214 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |.:|||.:::|:.||||:||:.:||...|.|....||||:|..:.|.::|::||||||||||||.
Mouse     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQ 132
            |||||:||||.|...:|||||:.:.||:.|..||.:.:::::|.::.:|:|||:|.:. |::..:
Mouse    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKRE 132

  Fly   133 IGEEFAKQHDMYFLETSAKEAENVERLFYEIAAEL---IGQARSKDGSSSAAAAAAQRQSEGSSI 194
            .||.||::|.:.|:|||||.|.|||..:...|.|:   |.|......:.:.......:||..||:
Mouse   133 EGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSITSSV 197

  Fly   195 GLGS----FSAKAAQSNCC 209
            |..|    .|.....|.||
Mouse   198 GPCSPQQNVSDIGPDSGCC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 78/167 (47%)
Rab2bNP_766189.1 PLN03108 1..216 CDD:178655 88/212 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 3/4 (75%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..216 8/26 (31%)

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