DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rabl2

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_030104587.1 Gene:Rabl2 / 68708 MGIID:1915958 Length:227 Species:Mus musculus


Alignment Length:27 Identity:11/27 - (40%)
Similarity:19/27 - (70%) Gaps:1/27 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DFMIKTV-EVEGEKIKLQIWDTAGQER 68
            |||.:.: |:|..|::.:..||:|||:
Mouse   191 DFMDEVLQELENFKLEQKEEDTSGQEQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 11/27 (41%)
Rabl2XP_030104587.1 P-loop containing Nucleoside Triphosphate Hydrolases <141..186 CDD:476819
Blue background indicates that the domain is not in the aligned region.

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