DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and rab19

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_073798761.1 Gene:rab19 / 555645 -ID:- Length:271 Species:Danio rerio


Alignment Length:197 Identity:79/197 - (40%)
Similarity:124/197 - (62%) Gaps:8/197 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFR 70
            |||||:|:|::.|||||:::.|........|..||||||.:::::|:|.::|:|:||||||||||
Zfish    68 FLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWDTAGQERFR 132

  Fly    71 SITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRD-DREIPTQIG 134
            :||||||||||..::.||:|.:.|||.||.|::.:::|..:.::.:|:|||.|.: .|::..:..
Zfish   133 TITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQYGAASLVLVLIGNKCDLEAQRQVLFEDA 197

  Fly   135 EEFAKQHD-MYFLETSAKEAENVERLFYEIAAELI---GQARSKDGSSSAAAAAAQRQS---EGS 192
            ...|::.. :..||||||...|:|..|..:|.||:   |....:|..|.:........|   ||.
Zfish   198 CTLAERSGALAALETSAKHHHNIEEAFQLMARELLVRHGGIHYQDNQSDSPTVYLHSDSHPIEGE 262

  Fly   193 SI 194
            .:
Zfish   263 QL 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 72/163 (44%)
rab19XP_073798761.1 None

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