Protein Alignment Rab30 and rab5b

DIOPT Version :10

• Sequence 1: NP_609094.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001005723.1
• Gene: rab5b / 448258
• XenbaseID: XB-GENE-489150
• Length: 215
• Species: Xenopus tropicalis
• Alignment Length: 204
• Identity: 77/204 - (37%)
• Similarity: 116/204 - (56%)
• Gaps: 13/204 - (6%)

  Fly     8 FKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSI 72
            ||:||:|.:.|||:.||.||.:|.|...|.:|||..|:.::|.::...:|.:|||||||||:.|:
 Frog    21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    73 TQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIGEE 136
            ...|||.|.|.|:||||:.|.||.....|::|:|..|:..::..|.|||.| ...|.:..:..:.
 Frog    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKRMVEYEEAQA 150

  Fly   137 FAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLGSF-S 200
            :|..:.:.|:|||||.|.||..||..||.:|   .:::..::|.|        .|.|.|:... .
 Frog   151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL---PKTEPQNTSGA--------PGRSRGVDLHEQ 204

  Fly   201 AKAAQSNCC 209
            .:..:|.||
 Frog   205 TQQNKSQCC 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_609094.1	Rab30	1..168	CDD:133314	68/160 (43%)
rab5b	NP_001005723.1	Rab5_related	20..182	CDD:206653	69/163 (42%)