DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and rab10

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:207 Identity:92/207 - (44%)
Similarity:132/207 - (63%) Gaps:13/207 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |..|||::|:|::||||||::.||:...|.....:|||:||.|||||::|:||||||||||||||
Zfish     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQ 132
            |.:||.||||.|..::|||||:...:|:.:..|||.|.|:||..|.::|:|||.|.:| |.:|..
Zfish    71 FHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKA 135

  Fly   133 IGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLG 197
            .||:.||:|.:.|.|||||...|:|:.|..:|.:::.:...|:.:           ||...|..|
Zfish   136 KGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPN-----------SENVDISTG 189

  Fly   198 SFSAKAAQSNCC 209
            . .....::.||
Zfish   190 G-GVTGWKTKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 85/164 (52%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 84/165 (51%)

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