DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab7

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster


Alignment Length:165 Identity:63/165 - (38%)
Similarity:99/165 - (60%) Gaps:5/165 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERF 69
            |.|.|::::|::.||||.|:.::....|.....||||.||..|.|.|....:.:|||||||||||
  Fly     6 KSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERF 70

  Fly    70 RSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSK----VLKILVGNKTDRDDREIP 130
            :|:..::||.|...:||||::...:|..|..|..|....|:.:    ...:::|||.|.|:|::.
  Fly    71 QSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKVDLDNRQVS 135

  Fly   131 TQIGEEFAK-QHDMYFLETSAKEAENVERLFYEIA 164
            |:..:::.: ::|:.:.||||||..|||..|..||
  Fly   136 TRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIA 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 63/165 (38%)
Rab7NP_524472.1 Rab7 9..179 CDD:206655 61/162 (38%)

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