Protein Alignment Rab30 and rab1bb

DIOPT Version :10

• Sequence 1: NP_609094.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001002129.2
• Gene: rab1bb / 415219
• ZFINID: ZDB-GENE-040625-133
• Length: 201
• Species: Danio rerio
• Alignment Length: 208
• Identity: 90/208 - (43%)
• Similarity: 134/208 - (64%)
• Gaps: 11/208 - (5%)

  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67
            :|.:|||::|:|::||||:|::.||....:.....:||||||.|:|:|::|:.||||||||||||
Zfish     4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68

  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDRE-IPT 131
            |||:||.||||.||.:|:|||::.|.:::.:..||:||..||:..|.|:|||||.|...:: :..
Zfish    69 RFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDY 133

  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196
            ...:|||....:.|||||||.|.|||:.|..:|.|:  :.|.:.|:|..        ||...:.:
Zfish   134 TTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEI--KKRMRPGASGG--------SEKPDLKI 188

  Fly   197 GSFSAKAAQSNCC 209
            .|...:.:...||
Zfish   189 ESTPVQQSGGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_609094.1	Rab30	1..168	CDD:133314	82/165 (50%)
rab1bb	NP_001002129.2	Rab1_Ypt1	7..172	CDD:206661	81/166 (49%)