Protein Alignment Rab30 and Rab23

DIOPT Version :9

• Sequence 1: NP_001245926.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_649574.1
• Gene: Rab23 / 40701
• FlyBaseID: FBgn0037364
• Length: 268
• Species: Drosophila melanogaster
• Alignment Length: 227
• Identity: 74/227 - (32%)
• Similarity: 127/227 - (55%)
• Gaps: 28/227 - (12%)

  Fly     2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            :|.:...|:|:|||.||||:.:::|:.:|:|......||||||:.:.:|::||.:::.:||||||
  Fly    32 DDIELAIKVVIVGNGGVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIEIDGEDVRIMLWDTAGQ 96

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDREIPT 131
            |.|..||::|||.|.|.:||:..:.:.:||.:.||.|:::...| ::..::|.||.|..::.:.|
  Fly    97 EEFDCITKAYYRGAQASVLVFSTTDRASFDAIKDWKRKVENECN-EIPTVIVQNKIDLIEQAVVT 160

  Fly   132 --QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAA---ELIGQ-----ARSKDGSS-------- 178
              :: |..||..:...:.||.||..||..:|..:|.   :|:.|     |.::..||
  Fly   161 ADEV-ETLAKLLNCRLIRTSVKEDINVASVFRYLATKCHQLMTQSYDQVAGNQQNSSHPPYSSTP 224

  Fly   179 --SAAAAAAQRQSEGSSI------GLGSFSAK 202
              ||.:....:.|.|:.:      |.||..|:
  Fly   225 TISAFSPTFTKSSSGTIVLRPAKKGHGSSVAR 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_001245926.1	Rab30	1..168	CDD:133314	61/170 (36%)
Rab23	NP_649574.1	Ras	50..199	CDD:278499	52/150 (35%)
		Rab23_like	50..197	CDD:133306	52/148 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454423
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840