DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab22a

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_063140363.1 Gene:Rab22a / 366265 RGDID:1311959 Length:201 Species:Rattus norvegicus


Alignment Length:186 Identity:73/186 - (39%)
Similarity:110/186 - (59%) Gaps:9/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSIT 73
            |:.|:|:.||||:.:|.||.:..|.|....|||..||.|||:.:.|..|..|||||||||||::.
  Rat     7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALA 71

  Fly    74 QSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQIGEEF 137
            ..|||.:.|.|:||||:.:.||..|.:|:||::::....::..:.|||.|..| ||:..:..:::
  Rat    72 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDY 136

  Fly   138 AKQHDMYFLETSAKEAENVERLFYEIAA-ELIGQARSKDGSSSAAAAAAQRQSEGS 192
            |......|:|||||.|.|:..||.||:. ..:.|.       |:..::.|.|::.|
  Rat   137 ADSIHAIFVETSAKNAININELFIEISKYHCVSQV-------SSLLSSGQTQTQCS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 68/160 (43%)
Rab22aXP_063140363.1 None

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