DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab30 and Rab10

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:207 Identity:90/207 - (43%)
Similarity:133/207 - (64%) Gaps:10/207 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |..|||::|:|::||||||::.||:...|.....:|||:||.|||||:.|:||||||||||||||
  Fly     6 YDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 70

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQ 132
            |.:||.||||.|..::|||||:.:.:|:.:..|||.|.|:||..|.|:::|||.| .|.|.:..:
  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNKCDMTDKRVVNKE 135

  Fly   133 IGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLG 197
            .||..|::|.:.|:|||||...|:||.|.|:|..::.:...::.:.:.......|:::..:.|  
  Fly   136 RGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIIDRRNQEKAPG-- 198

  Fly   198 SFSAKAAQSNCC 209
                   .|.||
  Fly   199 -------YSKCC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 85/164 (52%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 84/165 (51%)

Return to query results.
Submit another query.