DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and CG4789

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster


Alignment Length:104 Identity:32/104 - (30%)
Similarity:53/104 - (50%) Gaps:9/104 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIVLVGNAGVGKTCLVRRFT--QGLFPPGQGATIGVDFMIKTVEV-EGEKIK----LQIWDTAGQ 66
            :||:||::|||||.|....|  :.|..||.  |:|.:..:|.... ||...:    ::::|..|.
  Fly     8 RIVVVGDSGVGKTSLTHLITHNEALIRPGW--TVGCNIQVKMHPFREGTARECPYFVELFDVGGS 70

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREI 105
            ...::....:|.....:|||:|::...:...|.|||.||
  Fly    71 LNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEI 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 32/104 (31%)
CG4789NP_573166.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 32/104 (31%)

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