Protein Alignment Rab30 and Rab35

DIOPT Version :9

• Sequence 1: NP_001245926.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_001013064.1
• Gene: Rab35 / 288700
• RGDID: 1306362
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 91/208 - (43%)
• Similarity: 128/208 - (61%)
• Gaps: 11/208 - (5%)

  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67
            ||..|||::::|::||||:.|:.||....|......||||||.|:|||:.|||:|||||||||||
  Rat     4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68

  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDRE-IPT 131
            |||:||.:|||..|.:|:|||::...:|..:..||.||.:..:. |.:||||||.|..:|: :.|
  Rat    69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKNDDPERKVVET 132

  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196
            :...:||.|..:...||||||..|||.:| ....||:.:|: ||.     .|..|:|.:...:.|
  Rat   133 EDAYKFAGQMGIQLFETSAKENVNVEEMF-NCITELVLRAK-KDN-----LAKQQQQQQNDVVKL 190

  Fly   197 GSFSAKAAQSNCC 209
            ...|.:  :..||
  Rat   191 TKNSKR--KKRCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_001245926.1	Rab30	1..168	CDD:133314	80/165 (48%)
Rab35	NP_001013064.1	Rab35	3..201	CDD:133310	89/206 (43%)
		Effector region. /evidence=ECO:0000250	37..45		4/7 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920