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Protein Alignment Rab30 and Rab12
DIOPT Version :9
Sequence 1: | NP_001245926.1 |
Gene: | Rab30 / 33988 |
FlyBaseID: | FBgn0031882 |
Length: | 223 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_037149.1 |
Gene: | Rab12 / 25530 |
RGDID: | 3527 |
Length: | 243 |
Species: | Rattus norvegicus |
Alignment Length: | 165 |
Identity: | 85/165 - (51%) |
Similarity: | 116/165 - (70%) |
Gaps: | 2/165 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 FLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFR 70
|..:::::|:.|||||.|:.|||...|.....:|:||||.|||||:.|:||:||||||||||||.
Rat 40 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFN 104
Fly 71 SITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIG 134
|||.:|||||..:||||||:.:.|||.||.|::.|.:||:.....:|||||.| ..||||..|.|
Rat 105 SITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQG 169
Fly 135 EEFAKQ-HDMYFLETSAKEAENVERLFYEIAAELI 168
|:||:| ..|.|.|.|||:..||:.:|.::..:::
Rat 170 EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 204
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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