DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and RAB12

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:165 Identity:85/165 - (51%)
Similarity:116/165 - (70%) Gaps:2/165 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFR 70
            |..:::::|:.|||||.|:.|||...|.....:|:||||.|||||:.|:||:||||||||||||.
Human   137 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFN 201

  Fly    71 SITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIG 134
            |||.:|||||..:||||||:.:.|||.||.|::.|.:||:.....:|||||.| ..||||..|.|
Human   202 SITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQG 266

  Fly   135 EEFAKQ-HDMYFLETSAKEAENVERLFYEIAAELI 168
            |:||:| ..|.|.|.|||:..||:.:|.::..:::
Human   267 EKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 85/163 (52%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 84/163 (52%)

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