DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab22a

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_077756.2 Gene:Rab22a / 19334 MGIID:105072 Length:194 Species:Mus musculus


Alignment Length:202 Identity:73/202 - (36%)
Similarity:113/202 - (55%) Gaps:15/202 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSIT 73
            |:.|:|:.||||:.:|.||.:..|.|....|||..||.|||:.:.|..|..|||||||||||::.
Mouse     7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALA 71

  Fly    74 QSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQIGEEF 137
            ..|||.:.|.|:||||:.:.||..|.:|:||::::....::..:.|||.|..| ||:..:..:::
Mouse    72 PMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDY 136

  Fly   138 AKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLGSFSAK 202
            |......|:|||||.|.|:..||.||:..:    .|.|.:.::.....:.:.:.|.         
Mouse   137 ADSIHAIFVETSAKNAININELFIEISRRI----PSTDANPASGGKGFKLRRQPSE--------- 188

  Fly   203 AAQSNCC 209
             .:.:||
Mouse   189 -PKRSCC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 68/159 (43%)
Rab22aNP_077756.2 Rab5_related 5..167 CDD:206653 68/163 (42%)
Effector region. /evidence=ECO:0000250 34..42 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..194 2/33 (6%)

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