DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and Rab10

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_057885.1 Gene:Rab10 / 19325 MGIID:105066 Length:200 Species:Mus musculus


Alignment Length:207 Identity:93/207 - (44%)
Similarity:132/207 - (63%) Gaps:13/207 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |..|||::|:|::||||||::.||:...|.....:|||:||.|||||::|:||||||||||||||
Mouse     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDD-REIPTQ 132
            |.:||.||||.|..::|||||:...:|:.:..|||.|.|:||..|.::|:|||.|.|| |.:|..
Mouse    71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKG 135

  Fly   133 IGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLG 197
            .||:.|::|.:.|.|||||...|:|:.|..:|.:::.:...|:.:           ||...|..|
Mouse   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN-----------SENVDISSG 189

  Fly   198 SFSAKAAQSNCC 209
            . .....:|.||
Mouse   190 G-GVTGWKSKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 85/164 (52%)
Rab10NP_057885.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 84/165 (51%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 13/16 (81%)

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