Protein Alignment Rab30 and rabr-1

DIOPT Version :10

• Sequence 1: NP_609094.1
• Gene: Rab30 / 33988
• FlyBaseID: FBgn0031882
• Length: 223
• Species: Drosophila melanogaster
• Sequence 2: NP_508455.2
• Gene: rabr-1 / 180554
• WormBaseID: WBGene00019317
• Length: 218
• Species: Caenorhabditis elegans
• Alignment Length: 215
• Identity: 77/215 - (35%)
• Similarity: 124/215 - (57%)
• Gaps: 17/215 - (7%)

  Fly     4 YKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQER 68
            |..|||||:||:...||:|::.||.:..|.....:|:||||.:||:::..:||:|::|||||.||
 Worm     3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMER 67

  Fly    69 FRSITQSYYRSAHALILVYDISCQPTFDCLPD-WLREIQEYANSKVLKILVGNKTDRD-DREIPT 131
            :|:|..|||.|||.::.|||::.:.:|:.|.. ||:||:::|....:.:|||||.|.| :|::..
 Worm    68 YRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDF 132

  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196
            ...|:.|.:..:...|.|||...|.|..|:.:.|.:    |.:..:.|..:..:....|.||
 Worm   133 DRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAM----RERITAGSMHSDESDDNEEFSS--- 190

  Fly   197 GSF-------SAKAAQSNCC 209
             :|       |.|...::||
 Worm   191 -AFHVDGVIKSDKGKFTSCC 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_609094.1	Rab30	1..168	CDD:133314	67/165 (41%)
rabr-1	NP_508455.2	Rab	7..165	CDD:206640	64/157 (41%)