DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab30 and rab-1

DIOPT Version :9

Sequence 1:	NP_001245926.1	Gene:	Rab30 / 33988	FlyBaseID:	FBgn0031882	Length:	223	Species:	Drosophila melanogaster
Sequence 2:	NP_503397.1	Gene:	rab-1 / 178620	WormBaseID:	WBGene00004266	Length:	205	Species:	Caenorhabditis elegans

Alignment Length:	211	Identity:	94/211 - (44%)
Similarity:	133/211 - (63%)	Gaps:	16/211 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67
            :|.:|||::|:|::||||:||:.||....:.....:||||||.|:|:|::|:.||||||||||||
Worm     7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71

  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPT 131
            |||:||.||||.||.:|:||||:.|.||:.:..||:||..||...|.|:|||||.| ...|.:.|
Worm    72 RFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVET 136

  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAEL---IGQARSKDGSSSAAAAAAQRQSEGSS 193
            |..:::|.|..:.|||||||.:.|||:.|..:|:|:   :|..:...|:.......:|...:..|
Worm   137 QAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAPGVRITGSQPVQDKKS 201

  Fly   194 IGLGSFSAKAAQSNCC 209
            .|            ||
Worm   202 GG------------CC 205

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab30	NP_001245926.1	Rab30	1..168	CDD:133314	87/168 (52%)
rab-1	NP_503397.1	Rab1_Ypt1	10..175	CDD:206661	86/164 (52%)
rab-1	NP_503397.1	RAB	12..175	CDD:197555	85/162 (52%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920