DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and RabX6

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_309994.4 Gene:RabX6 / 1271237 VectorBaseID:AGAMI1_008466 Length:210 Species:Anopheles gambiae


Alignment Length:176 Identity:64/176 - (36%)
Similarity:97/176 - (55%) Gaps:12/176 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIVLVGNAGVGKTCLVRRFTQGLF--PPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRS 71
            ||:|.|..||||:.:.|||....|  ...:.:|:|:|...:|..|..::||||:|||.|.||..|
Mosquito    11 KIILCGEYGVGKSSIFRRFATNNFVTAADRKSTLGLDHYGRTFTVGDKEIKLQLWDTGGMERVAS 75

  Fly    72 ITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYA-NSKVLKILVGNKTDRD----DREIPT 131
            :|.|||:.|.|.|||:.:..:.:|..|...:.::..|| |:|:  .|||||.|.:    |..:..
Mosquito    76 VTSSYYKFAEAAILVFALDNESSFHALSQHMLDVVTYAENAKI--FLVGNKVDLESSSTDPPVTD 138

  Fly   132 QIGEEFAKQ-HDMY--FLETSAKEAENVERLFYEIAAELIGQARSK 174
            ...|.|.:| |.:.  ..:||.|..:.:|.:|.:||..|:...||:
Mosquito   139 ADMESFCEQCHSLISATYKTSCKTGDGLEEMFRDIAGTLVESNRSR 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 61/168 (36%)
RabX6XP_309994.4 None

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