DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and RabX4

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_308884.2 Gene:RabX4 / 1270205 VectorBaseID:AGAMI1_005765 Length:219 Species:Anopheles gambiae


Alignment Length:228 Identity:84/228 - (36%)
Similarity:127/228 - (55%) Gaps:23/228 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67
            |:...:|::::|::.|||||:|.|:....:.....:|||:||..|.:.::|..||||||||||||
Mosquito     4 DFAATYKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTAGQE 68

  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRD--DREIP 130
            |||::|.:|||.|..::|:||::...:|:.|..|||.|||.|...|:|:|.|||.:.:  .|.:.
Mosquito    69 RFRTLTTAYYRGAMGILLMYDVTSLESFNNLSYWLRNIQENAAPDVVKVLAGNKCECNPPQRAVD 133

  Fly   131 TQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSK-----DGSSSAAAAAAQRQSE 190
            .:.||:.|:..||.|.|.|.|:..|:|..|..:|.::..|...:     ||..........:...
Mosquito   134 KERGEKIAENFDMPFFEVSCKQNINIEDAFLTLARKIREQREHRGENFDDGDRQKGLQDMIKNGP 198

  Fly   191 GSSIGLGSFSAKAAQSNCCGGLASGGSNSSQGG 223
            ||: |||.|:           |.|||    .||
Mosquito   199 GSN-GLGPFT-----------LGSGG----DGG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 69/166 (42%)
RabX4XP_308884.2 RAB 9..170 CDD:197555 68/160 (43%)

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