DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab30 and RABL2B

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001336937.1 Gene:RABL2B / 11158 HGNCID:9800 Length:239 Species:Homo sapiens


Alignment Length:165 Identity:60/165 - (36%)
Similarity:92/165 - (55%) Gaps:5/165 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRSIT 73
            ||:.:|::.|||:.|:.||....|.|.|.:|..:.....|..|:|..|.:..|||||||||:|:.
Human    23 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTILVDFWDTAGQERFQSMH 87

  Fly    74 QSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDREIPTQIGEEFA 138
            .|||..|||.|:|:|:..:.|:..|..|..|::|: ..::..|:|.||.|.|..  .||....||
Human    88 ASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREF-RPEIPCIVVANKIDADIN--VTQKSFNFA 149

  Fly   139 KQHDMYFLETSAKEAENVERLFY--EIAAELIGQA 171
            |:..:.....||.:..||.:::.  |:|::|...|
Human   150 KKFSLPLYFVSAADGTNVVKVWLTAEVASKLFNDA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 58/160 (36%)
RABL2BNP_001336937.1 RabL2 22..192 CDD:133324 60/165 (36%)

Return to query results.
Submit another query.