DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab30 and Rab37

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001417255.1 Gene:Rab37 / 100364984 RGDID:2319982 Length:253 Species:Rattus norvegicus


Alignment Length:205 Identity:89/205 - (43%)
Similarity:127/205 - (61%) Gaps:17/205 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIVLVGNAGVGKTCLVRRFTQGLFPPGQG-ATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRS 71
            |.::|:|::||||||.:.:|..|.|..|.. ||:|:||..|.|.|:|.::|||||||||||||||
  Rat    60 FTVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGARVKLQIWDTAGQERFRS 124

  Fly    72 ITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTD-RDDREIPTQIGE 135
            :|.:|||.|.||:|:|||:.|.:||.:..||.||.|||...|:.:|:|||.| ..:|.|.::.||
  Rat   125 VTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGE 189

  Fly   136 EFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGLGSF- 199
            ..|:::.:.|:|||||...|||..|..||.||              ...|.:|.:..|..:..: 
  Rat   190 TLAREYGVPFMETSAKTGMNVELAFLAIAKEL--------------KYRAGKQPDEPSFQIRDYV 240

  Fly   200 SAKAAQSNCC 209
            .::..:|:||
  Rat   241 ESQKKRSSCC 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 82/161 (51%)
Rab37NP_001417255.1 None

Return to query results.
Submit another query.