DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab30 and si:dkey-16l2.16

DIOPT Version :10

Sequence 1:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster
Sequence 2:XP_021327130.1 Gene:si:dkey-16l2.16 / 100003902 ZFINID:ZDB-GENE-141219-36 Length:209 Species:Danio rerio


Alignment Length:212 Identity:86/212 - (40%)
Similarity:128/212 - (60%) Gaps:10/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQ 66
            :||..|||::::|::.|||:.|:.||....|......||||||.|:|||::||::||||||||||
Zfish     4 KDYHHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEIDGERVKLQIWDTAGQ 68

  Fly    67 ERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRDDRE-IP 130
            ||||:||.:|||:.|.:|:|||::...:|..:..||.||.:..:: |.|||||||.|...:: :.
Zfish    69 ERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDN-VCKILVGNKNDDPSKKLVD 132

  Fly   131 TQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIG 195
            ||....|.:...:...||||||..|||.:|......::   |:|..|.|  .|..:|:.|..::.
Zfish   133 TQDAMRFGESVGVRLFETSAKENINVEEMFMAFTHMVL---RAKKQSQS--RAEREREREKDTVH 192

  Fly   196 LGSFSAKAAQ---SNCC 209
            :.|...:..:   ..||
Zfish   193 INSHRDRERRKKGKKCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab30NP_609094.1 Rab30 1..168 CDD:133314 76/166 (46%)
si:dkey-16l2.16XP_021327130.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..209 CDD:476819 84/210 (40%)

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