DRSC/TRiP Functional Genomics Resources

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Protein Alignment MME1 and YMC1

DIOPT Version :9

Sequence 1:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_015383.1 Gene:YMC1 / 856171 SGDID:S000006262 Length:307 Species:Saccharomyces cerevisiae


Alignment Length:292 Identity:97/292 - (33%)
Similarity:142/292 - (48%) Gaps:20/292 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VKSFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFYRGI 79
            ||..:||..||:..||||.|.||.||||||..||..        .::...:....||.||||:|.
Yeast    26 VKDLLAGTAGGIAQVLVGQPFDTTKVRLQTSSTPTT--------AMEVVRKLLANEGPRGFYKGT 82

  Fly    80 SAPLVGVTPIYAVDFAVYAAGKRLF---QTDDHIRLTYPQIFAAGALAGVCSALVTVPTDRIKVL 141
            ..||:||....::.|.|..|.||.|   ..|....|:.||.:|.|...|:.::.:..|.:.:::.
Yeast    83 LTPLIGVGACVSLQFGVNEAMKRFFHHRN
ADMSSTLSLPQYYACGVTGGIVNSFLASPIEHVRIR 147

  Fly   142 LQTQTVSNGPLLYNGTIDTAAKLYRQGGIRSLFKGTCACILRDS-PTGFYFVTYEFL--QELARK 203
            |||||.|.....:.|.::...||...   ::|.:|....|||:. ..|.||:.||.|  .::.::
Yeast   148 LQTQTGSGTNAEFKGPLECIKKLRHN---KALLRGLTPTILREGHGCGTYFLVYEALIANQMNKR 209

  Fly   204 KSANGK-ISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQ--SAPEGTYKHGIRSVFRNLMATEGP 265
            :....| |......:.|..:|...|.:..|.||:||.:|  :..:..:.:.|.||.:.|.|..|.
Yeast   210 RGLERKDIPAWKLCIFGALSGTALWLMVYPLDVIKSVMQTDNLQKPKFGNSISSVAKTLYANGGI 274

  Fly   266 KALFRGILPILLRAFPSTAAVFFGVELTNDLL 297
            .|.|:|..|.:|||.|:..|.|...||...||
Yeast   275 GAFFKGFGPTMLRAAPANGATFATFELAMRLL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 38/94 (40%)
Mito_carr 111..205 CDD:278578 27/96 (28%)
Mito_carr 208..297 CDD:278578 29/91 (32%)
YMC1NP_015383.1 Mito_carr 25..111 CDD:395101 38/92 (41%)
Mito_carr 116..201 CDD:395101 26/87 (30%)
Mito_carr 215..307 CDD:395101 31/92 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101471
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1756
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

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