DRSC/TRiP Functional Genomics Resources

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Protein Alignment MME1 and Tyler

DIOPT Version :9

Sequence 1:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster


Alignment Length:407 Identity:84/407 - (20%)
Similarity:145/407 - (35%) Gaps:137/407 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PVKSFIAGGVGGMCNVLVGHPLDTIKVRLQTM------PT------------------------P 48
            |::..::..|||:....|..||:.:|.|:||.      ||                        |
  Fly    45 PMQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVP 109

  Fly    49 PPGQPPR----YKGVIDCAARTFRYEGFRGFYRGISAPLVGVTPIYAVDFAVYA----------- 98
            .||:.|:    .:|.:|...:.....||.|.:.|:|..||...|...:.|..|.           
  Fly   110 KPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYL 174

  Fly    99 ------------------AGKRLFQTDDHIRLTYPQIFAAGAL-------AGVCSALVTV----P 134
                              .|..|.|....|.::.....:..:|       :|:||..:.|    |
  Fly   175 VSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTIVVTAITP 239

  Fly   135 TDRIKVLLQTQTVSNGPLLYNGTIDTAAKLYRQGGIRSLFKGTCACILRDSP-TGFYFVTYEFLQ 198
            .:.:::.:|::.::     |.........|.||.||..|::|....::||:| :|.|:..||.::
  Fly   240 IEMVRIKMQSEYMT-----YAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYEAIK 299

  Fly   199 ELARKKSANGKISTTS-----TILSGGTAGIVFWTLAVPFDVLKSRLQ----------------S 242
            .         ..|.|.     :.|:|..:|.|...:.:|||::.:..|                .
  Fly   300 R---------AFSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTG 355

  Fly   243 APEGT---------------YKHGIRSVFRNLMATEGPKALFRGILPILLRAFPSTA-------- 284
            |..||               .:..:.|..|.:...:|.:.|:.|::|.:||..|:.|        
  Fly   356 AGTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEY 420

  Fly   285 --AVFFGVELTNDLLKA 299
              :.||...|  ||.:|
  Fly   421 SKSFFFHYNL--DLQEA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 32/155 (21%)
Mito_carr 111..205 CDD:278578 22/105 (21%)
Mito_carr 208..297 CDD:278578 27/134 (20%)
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 29/125 (23%)
Mito_carr 216..302 CDD:278578 22/99 (22%)
Mito_carr 306..429 CDD:278578 23/122 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441436
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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