DRSC/TRiP Functional Genomics Resources

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Protein Alignment MME1 and SPBC29A3.11c

DIOPT Version :9

Sequence 1:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_595839.1 Gene:SPBC29A3.11c / 2540397 PomBaseID:SPBC29A3.11c Length:297 Species:Schizosaccharomyces pombe


Alignment Length:298 Identity:76/298 - (25%)
Similarity:124/298 - (41%) Gaps:69/298 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NPVKSFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFYR 77
            :|..:|.|..|....:.::|:|||:||||.||...|.         :..|.....:.||.:|.||
pombe    16 SPASTFSAALVSSAISNVIGYPLDSIKVRQQTYNFPT---------IRSCFQNAVKNEGLKGLYR 71

  Fly    78 GISAPLVGVTPIYAVDFAVYAAGKRLFQTDDHIRLTYPQI------FAAGALAGVCSALVTVPTD 136
            |::.||:..|...:|.|.||          |.::||:..:      |.:|...|...:|...|.:
pombe    72 GLTLPLISATLSRSVSFTVY----------DSLKLTFAHVDPTLRYFISGLGTGTFISLFACPFE 126

  Fly   137 ------RIKVLLQTQTV-----SNGPLLYN---GTIDTAAKLYRQGGIRSLFKGTCACILRDS-P 186
                  :|.:||:...:     :|..|...   .:..:|:.:.|:.|..:|:.|....:.||: .
pombe   127 YSKLYSQIDMLLRKTNMGRRQETNSKLSVRPPLSSFQSASDIVRRYGFTALWNGYRYHLTRDALG 191

  Fly   187 TGFYFVTYE-FLQELARKKSANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQSAPEGTYKH 250
            :..||..|| |.:.|.    ||......:...||...|.:.|.|..|.|..||.:|         
pombe   192 SACYFTIYETFKKNLI----ANDVKPHFAYAFSGAFCGALSWILVFPVDTAKSIVQ--------- 243

  Fly   251 GIRSVFRN-LMATEGPKA--------LFRGILPILLRA 279
                  || |::.:.|.:        ::|||...|:|:
pombe   244 ------RNTLLSIKTPLSSIPWLSFTIYRGIGISLMRS 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 29/93 (31%)
Mito_carr 111..205 CDD:278578 25/115 (22%)
Mito_carr 208..297 CDD:278578 19/81 (23%)
SPBC29A3.11cNP_595839.1 Mito_carr 16..98 CDD:278578 31/100 (31%)
Mito_carr 103..207 CDD:278578 22/103 (21%)
Mito_carr 210..291 CDD:278578 19/81 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0758
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45624
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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