DRSC/TRiP Functional Genomics Resources

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Protein Alignment MME1 and slc-25A29

DIOPT Version :9

Sequence 1:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_872134.1 Gene:slc-25A29 / 179969 WormBaseID:WBGene00008320 Length:360 Species:Caenorhabditis elegans


Alignment Length:285 Identity:110/285 - (38%)
Similarity:158/285 - (55%) Gaps:25/285 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFYRGISAPLV 84
            ||.:||...||.||||||:||||||.    .|..|:|:|...|.....:.|||||.|:|:|:||:
 Worm     9 AGSLGGAAGVLAGHPLDTVKVRLQTQ----SGPTPQYRGTFHCFKLIVQKEGFRGLYKGMSSPLL 69

  Fly    85 GVTPIYAVDFAVYAAGKRLFQTDDHIRLTYPQIFAAGALAGVCSALVTVPTDRIKVLLQTQTVSN 149
            .::.|.|:.|.|:....|..:..|.|    ...|..|..||:..:::..||:|||:|||.|. ..
 Worm    70 SLSAINAIVFGVHGGTCRQMEDPDSI----TSHFVGGCAAGMAQSVIAAPTERIKLLLQIQD-DK 129

  Fly   150 GPLLYNGTIDTAAKLYRQGGIRSLFKGTCACILRDSPT-GFYFVTYEFLQELARKKSANGKISTT 213
            ....:||.||...:|.|..|::||.:|..|.:.||:|. |.||.:||:   :||....:|:.||.
 Worm   130 AHTKFNGPIDATKQLLRTHGLKSLTRGFLATVARDAPAFGVYFASYEW---MARSMCKDGETSTL 191

  Fly   214 ST---ILSGGTAGIVFWTLAVPFDVLKSRLQSAPEGTYK---HGIRSVFRNLMATEGPKALFRGI 272
            |:   :.:|||||::.|......|::|||.|:  :.:||   |.|:..:    ...|.:..|.|:
 Worm   192 SSGQLLFAGGTAGMLSWLFNYQTDIIKSRFQA--DNSYKSYMHCIKQTY----LERGYRGFFVGL 250

  Fly   273 LPILLRAFPSTAAVFFGVELTNDLL 297
            ...|:|||||.||.||.||.|..:|
 Worm   251 NSALIRAFPSNAATFFTVEWTYRIL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 38/86 (44%)
Mito_carr 111..205 CDD:278578 34/94 (36%)
Mito_carr 208..297 CDD:278578 35/94 (37%)
slc-25A29NP_872134.1 PTZ00169 1..258 CDD:240302 98/266 (37%)
Mito_carr 1..81 CDD:278578 36/75 (48%)
Mito_carr 91..186 CDD:278578 36/102 (35%)
Mito_carr 189..279 CDD:278578 35/93 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 1 1.000 - - FOG0000326
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101471
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1756
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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