DRSC/TRiP Functional Genomics Resources

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Protein Alignment MME1 and LOC100495907

DIOPT Version :9

Sequence 1:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_002934951.1 Gene:LOC100495907 / 100495907 -ID:- Length:309 Species:Xenopus tropicalis


Alignment Length:305 Identity:100/305 - (32%)
Similarity:143/305 - (46%) Gaps:44/305 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SFIAGGVGGMCNVLVGHPLDTIKVRLQTMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFYRGISA 81
            :.|||.:||:..|:.|.|.||.||::||.||       .|:|.:|||.||:..||.||.|.|.:.
 Frog    17 NLIAGAMGGVACVVSGQPFDTAKVKMQTFPT-------MYRGFVDCAVRTYHAEGLRGLYHGTTP 74

  Fly    82 PLVGVTPIYAVDFAVYAAGKRLF----------QTDDHIRLTYPQIFAAGALAGVCSALVTVPTD 136
            .||......||.||.|...:.|.          |..|..:.|      ||:||.|.|:|...||:
 Frog    75 ALVANAAENAVLFACYGFCQNLVSR
CLGLQDPSQLSDWHKAT------AGSLASVFSSLALCPTE 133

  Fly   137 RIKVLLQTQTVSNGPLLYNGTIDTAAK---------LYRQGGIRSLFKGTCACILRDSPTGFYF- 191
            .:|..:|||    ..:..:|..|...|         :....||..||:|..:..||:.|..|:| 
 Frog   134 LVKCRIQTQ----HEMRLSGNKDIPHKSTPWSVVRAILSSEGIPGLFRGLSSTWLREIPGYFFFF 194

  Fly   192 ----VTYEFLQELARKKSANGKISTTSTILSGGTAGIVFWTLAVPFDVLKSRLQSAPEGTYKHGI 252
                ::.:.|.:....|...|.:..|   :|||..|..||....|.|.:|||:|......:..|.
 Frog   195 GGYELSIDIL
SQRESSKDPPGALVVT---VSGGVGGACFWLAVYPVDSVKSRVQVLTLTPHSKGF 256

  Fly   253 RSVFRNLMATEGPKALFRGILPILLRAFPSTAAVFFGVELTNDLL 297
            .....:::.|||...|:.|::|.::|||||.||:|...|:|...|
 Frog   257 IISLLHILRTEGFLPLYSGLMPTVVRAFPSNAALFLAYEMTKRTL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 38/99 (38%)
Mito_carr 111..205 CDD:278578 28/107 (26%)
Mito_carr 208..297 CDD:278578 31/88 (35%)
LOC100495907XP_002934951.1 Mito_carr 14..99 CDD:365909 37/88 (42%)
Mito_carr 109..204 CDD:365909 28/104 (27%)
Mito_carr 231..303 CDD:365909 25/71 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54095
OrthoDB 1 1.010 - - D1072378at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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