DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gart and ADE5,7

DIOPT Version :9

Sequence 1:NP_001285698.1 Gene:Gart / 33986 FlyBaseID:FBgn0000053 Length:1353 Species:Drosophila melanogaster
Sequence 2:NP_011280.1 Gene:ADE5,7 / 852617 SGDID:S000003203 Length:802 Species:Saccharomyces cerevisiae


Alignment Length:804 Identity:311/804 - (38%)
Similarity:467/804 - (58%) Gaps:52/804 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCR--NLDAKTLDPKDFEAIAKWSKE 67
            :||:|:|.|||.:..||:|||.|.:||..||:.|...::..|  |.|. |.|..:|..:...:.|
Yeast     4 ILVLGNGAREHVLVTKLAQSPTVGKIYVAPGNGGTATMDPSRVINWDI-TPDVANFARLQSMAVE 67

  Fly    68 NQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGKQGAQIEADKKWAKDFMLRHGIPTARYESFTD 132
            ::|.|||.|||.||..|:..|..|.|||.|||..:.||:||.|.::|.||.:|.||||.|:.||:
Yeast    68 HKINLVVPGPELPLVNGITSVFHSVGIPVFGPSVKAAQLEASKAFSKRFMSKHNIPTASYDVFTN 132

  Fly   133 TEKAKAFIRSAPYPALVVKAAGLAAGKGVVVAANAKEACQAVDEILGDLKYG-QAGATLVVEELL 196
            .|:|.:|:::....|.|:||.|:||||||::.::..|:.||:.:|:...::| :||..:|:|:.|
Yeast   133 PEEAISFLQAHTDKAFVIKADGIAAGKGVIIPSSIDESVQAIKDIMVTKQFGEEAGKQVVIEQFL 197

  Fly   197 EGEEVSVLAFTDGKSVRAMLPAQDHKRLGNGDTGPNTGGMGAYCPCPLISQPALELVQKAVLERA 261
            ||:|:|:|...||.|...:..||||||:.:||.|.||||||||.|.|:.:...|:.:...:::..
Yeast   198 EGDEISLLTIVDGYSHFNLPVAQDHKRIFDGDKGLNTGGMGAYAPAPVATPSLLKTIDSQIVKPT 262

  Fly   262 VQGLIKERINYQGVLYAGLMLTRDG------PRVLEFNCRFGDPETQVILPLL--ESDLFDVMEA 318
            :.|:.::.:.:.|||:.|::|.:|.      |.|||:|.||||||||.:|.||  ::||..|..|
Yeast   263 IDGMRRDGMPFVGVLFTGMILVKDSKTNQLVPEVLEYNVRFGDPETQAVLSLLDDQTDLAQVFLA 327

  Fly   319 CCSGKLDKIPLQWRNGVSAVGVILASAGYPETSTKGCIIS----GLPAANTPTQLVFHSGLAVNA 379
            ....:||.:.:...:..|||.|::|:.||||:..||..|:    .||    |...:|.:|...::
Yeast   328 AAEHRLDSVNIGIDDTRSAVTVVVAAGGYPESYAKGDKITLDTDKLP----PHTQIFQAGTKYDS 388

  Fly   380 QKEA-LTNGGRVLIAIALDGSLKEAAAKATKLAGSISFSGSGAQYRTDIAQKAFKIASASTPGLS 443
            ..:: ||||||||...:....|:.|.....:....:.|..|  .||.|||.:||:.:.:|...::
Yeast   389 ATDSLLTNGGRVLSVTSTAQDLRTAVDTVYEAVKCVHFQNS--YYRKDIAYRAFQ
NSESSKVAIT 451

  Fly   444 YKDSGVDIDAGDALVQRIKPLSRGTQRPGVIGGLGGFGGLFRLKELTYK---EPVIAEATQGVGA 505
            |.||||.:|.|:.|||.||.:.|.|:|||....:|||||||.|.:..::   :.::..||.|||.
Yeast   452 YADSGVSVDNGNNLVQTIKEMVRSTRRPGADSDIGGFGGLFDLAQAGFRQNEDTLLVGATDGVGT 516

  Fly   506 KIHLALTHELYENVGYDLFALAANDVLEVGAEPVAFLDYIACGKLQVPLAAQLVKGMADGCRDAR 570
            |:.:|....::..||.||.|:..||::..||||:.||||.|.|.|.:.:|:..|.|:|:||..:.
Yeast   517 KLIIAQETGIHNTVGIDLVAMNVNDLVVQGAEPLFFLDYFATGALDIQVASDFVSGVANGCIQSG 581

  Fly   571 CALVGGETAEMPSLYAPGQHDMAGYCVGIVEQSRILPRFDLYQPGDLLIGLPSSGLHCAGFNEIL 635
            ||||||||:|||.:|.||.:|..|..||.|.:..|||:.:....||:|:||.|||:|..||:  |
Yeast   582 CALVGGETSEMPGMYPPGHYDTNGTAVGAVLRQDILPKINEMAAGDVLLGLASSGVHSNGFS--L 644

  Fly   636 TQLAASKVNLRERSPVDGGDDGLTLAHVLATPTQLYVQQLLPHLQKGDEIKSVAHVT-HGLLNDI 699
            .:.....|.|...:|.. .|:..||...:..||::||:||||.::: ..:..:||:| .||:.:|
Yeast   645 VRKIIQHVALPWDAPCP-WDESKTLGEGILEPTKIYVKQLLPSIRQ-RLLLGLAHITGGGLVENI 707

  Fly   700 LRLLPDGFETTLDFGAVPVPKIFGWLAGKLKLSAQTILERHNCGIGMVLILPQSSQ--------- 755
            .|.:||..:..:|.....||::|.|......:....||...|.|:|||||:.:.:.         
Yeast   708 PRAIPDHLQARVDMSTWEVPRVFKWFGQAGNVPHDDILRTFNMGVGMVLIVKRENVKAVCDSLTE 772

  Fly   756 ----LWRTSLPGAKVLGVLQRRSK 775
                :|.        ||.||.|.|
Yeast   773 EGEIIWE--------LGSLQERPK 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GartNP_001285698.1 PRK00885 4..433 CDD:234856 175/443 (40%)
GARS_N 4..107 CDD:280931 45/103 (44%)
GARS_A 108..301 CDD:279419 82/199 (41%)
GARS_C 337..430 CDD:280930 33/97 (34%)
PRK05385 442..752 CDD:235439 127/313 (41%)
PurM 485..752 CDD:100032 103/270 (38%)
PRK05385 836..1122 CDD:235439
PurM 840..1123 CDD:100032
FMT_core_GART 1155..1339 CDD:187714
ADE5,7NP_011280.1 purD 2..441 CDD:273315 175/443 (40%)
purM 450..786 CDD:273316 132/347 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346661
Domainoid 1 1.000 170 1.000 Domainoid score I778
eggNOG 1 0.900 - - E1_COG0151
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H637
Inparanoid 1 1.050 522 1.000 Inparanoid score I191
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55216
OrthoFinder 1 1.000 - - FOG0003222
OrthoInspector 1 1.000 - - oto99277
orthoMCL 1 0.900 - - OOG6_100441
Panther 1 1.100 - - LDO PTHR10520
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1035
SonicParanoid 1 1.000 - - X2637
TreeFam 1 0.960 - -
1514.790

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