DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gart and PUR2

DIOPT Version :9

Sequence 1:NP_001285698.1 Gene:Gart / 33986 FlyBaseID:FBgn0000053 Length:1353 Species:Drosophila melanogaster
Sequence 2:NP_172454.1 Gene:PUR2 / 837515 AraportID:AT1G09830 Length:532 Species:Arabidopsis thaliana


Alignment Length:442 Identity:187/442 - (42%)
Similarity:263/442 - (59%) Gaps:16/442 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLVIGSGGREHAICWKLSQSPKVAQIYALPGSHGIQLVEKCRNLDA---KTLDPKDFEAIAKWSK 66
            |||||.||||||:|..|.:||....:...||:.||.     .:.||   ..||..|..|:..:.:
plant    97 VLVIGGGGREHALCHALKRSPSCDSVLCAPGNAGIS-----SSGDATCVPDLDISDSLAVISFCQ 156

  Fly    67 ENQIALVVVGPEDPLALGLGDVLQSAGIPCFGPGKQGAQIEADKKWAKDFMLRHGIPTARYESFT 131
            :..:.|||||||.||..||.:.|..|||..|||..|.|.:|..|.:.|:...::.||||:|::|:
plant   157 KWNVGLVVVGPEVPLVAGLANDLVKAGILTFGPSSQAAALEGSKNFMKNLCHKYNIPTAKYKTFS 221

  Fly   132 DTEKAKAFIRSAPYPALVVKAAGLAAGKGVVVAANAKEACQAVDEILGDLKYGQAGATLVVEELL 196
            |...||.:|:....| :|:||.||||||||.||...:||.:|||.:|....:|.||..:||||.|
plant   222 DASAAKEYIQEQGAP-IVIKADGLAAGKGVTVAMELEEAFEAVDSMLVKGVFGSAGCQVVVEEFL 285

  Fly   197 EGEEVSVLAFTDGKSVRAMLPAQDHKRLGNGDTGPNTGGMGAYCPCPLISQPALELVQKAVLERA 261
            ||||.|..|..||::...:..||||||:|:|||||||||||||.|.|::::...:.|.::::...
plant   286 EGEEASFFALVDGENAIPLESAQDHKRVGDGDTGPNTGGMGAYSPAPVLTKELQDFVMESIIHPT 350

  Fly   262 VQGLIKERINYQGVLYAGLMLTRDG--PRVLEFNCRFGDPETQVILPLLESDLFDVMEACCSGKL 324
            |:|:.:|...:.|||:||||:.:..  |:::|||.||||||.||::..|||||..|:.|.|.|:|
plant   351 VKGMAEEGCKFVGVLFAGLMIEKKSGLPKLIEFNVRFGDPECQVLMMRLESDLAKVLLAACKGEL 415

  Fly   325 DKIPLQWRNGVSAVGVILASAGYPETSTKGCIISGLPAAN--TPTQLVFHSGLAVNAQKEALTNG 387
            ..:.|.|... ||:.|::||.|||.:..||.||..|..|.  .|...|||:|..::::...:..|
plant   416 SGVSLDWSKD-SAMVVVMASNGYPGSYEKGSIIKNLEEAERVAPGVKVFHAGTGLDSEGNVVATG 479

  Fly   388 GRVLIAIALDGSLKEAAAKATKLAGSISFSGSGAQYRTDIAQKAFKIASAST 439
            ||||...|....|:||..:|......|::  .|..:|.||..:|.:....:|
plant   480 GRVLGVTAKGKDLEEARERAYSAVQQINW--PGGFFRHDIGWRALRQKQVAT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GartNP_001285698.1 PRK00885 4..433 CDD:234856 186/434 (43%)
GARS_N 4..107 CDD:280931 45/104 (43%)
GARS_A 108..301 CDD:279419 90/194 (46%)
GARS_C 337..430 CDD:280930 33/94 (35%)
PRK05385 442..752 CDD:235439
PurM 485..752 CDD:100032
PRK05385 836..1122 CDD:235439
PurM 840..1123 CDD:100032
FMT_core_GART 1155..1339 CDD:187714
PUR2NP_172454.1 PLN02257 98..531 CDD:177899 186/441 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 183 1.000 Domainoid score I1017
eggNOG 1 0.900 - - E1_COG0151
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H637
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105366at2759
OrthoFinder 1 1.000 - - FOG0003222
OrthoInspector 1 1.000 - - oto3964
orthoMCL 1 0.900 - - OOG6_100441
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2637
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.720

Return to query results.
Submit another query.